Fragmentation (BioFSharp.Mz) | BioFSharp.Mz

BioFSharp.Mz

Fragmentation Module

Namespace: BioFSharp.Mz
Assembly: BioFSharp.Mz.dll

Types and nested modules

Type/Module	Description
Series
FragmentMasses
LadderedTaggedMass

Functions and values

Function or value	Description
`aminoLossSet` Full Usage: `aminoLossSet` Returns: `Set<AminoAcid>`	Set of amino acids that are prone to cleave off an NH2 molecule of their side chain uppon fragmentation. Returns: `Set<AminoAcid>`
`createFragmentMasses targetMasses decoyMasses` Full Usage: `createFragmentMasses targetMasses decoyMasses` Parameters: targetMasses : `PeakFamily<TaggedMass> list` decoyMasses : `PeakFamily<TaggedMass> list` Returns: `FragmentMasses`	targetMasses : `PeakFamily<TaggedMass> list` decoyMasses : `PeakFamily<TaggedMass> list` Returns: `FragmentMasses`
`createLadderedTaggedMass iontype mass number charge` Full Usage: `createLadderedTaggedMass iontype mass number charge` Parameters: iontype : `IonTypeFlag` mass : `float` number : `int` charge : `float` Returns: `LadderedTaggedMass`	iontype : `IonTypeFlag` mass : `float` number : `int` charge : `float` Returns: `LadderedTaggedMass`
`isAminoLoss a` Full Usage: `isAminoLoss a` Parameters: a : `AminoAcid` Returns: `bool`	Returns true if the amino acid "a" is prone to cleave off an NH2 molecule of their side chain uppon fragmentation. a : `AminoAcid` Returns: `bool`
`isWaterLoss a` Full Usage: `isWaterLoss a` Parameters: a : `AminoAcid` Returns: `bool`	Returns true if the amino acid "a" is prone to cleave off an H2O molecule of their side chain uppon fragmentation. a : `AminoAcid` Returns: `bool`
`ladderAndChargeElement chargeList sortedList` Full Usage: `ladderAndChargeElement chargeList sortedList` Parameters: chargeList : `float list` sortedList : `PeakFamily<TaggedMass> list` Returns: `PeakFamily<LadderedTaggedMass> list`	chargeList : `float list` sortedList : `PeakFamily<TaggedMass> list` Returns: `PeakFamily<LadderedTaggedMass> list`
`ladderElement ionList chargeList` Full Usage: `ladderElement ionList chargeList` Parameters: ionList : `PeakFamily<TaggedMass> list` chargeList : `float list` Returns: `PeakFamily<LadderedTaggedMass> list`	ionList : `PeakFamily<TaggedMass> list` chargeList : `float list` Returns: `PeakFamily<LadderedTaggedMass> list`
`waterLossSet` Full Usage: `waterLossSet` Returns: `Set<AminoAcid>`	Set of amino acids that are prone to cleave off an H2O molecule of their side chain uppon fragmentation. Returns: `Set<AminoAcid>`